Difference between revisions of "Cluster:Todo"
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* Work with Betsy Ward to get the plumbing for F@C setup on the D224 OSX machines. Local user, document the setup with a Wiki entry. (Alex) | * Work with Betsy Ward to get the plumbing for F@C setup on the D224 OSX machines. Local user, document the setup with a Wiki entry. (Alex) | ||
* Console (JoshM) | * Console (JoshM) | ||
| − | + | ** Environment variable called $FATCHOME | |
| − | + | ** Command line | |
| − | + | ** Sockets to communicate with mother | |
| − | + | ** Variable in mother.conf for console port | |
| − | + | ** Mother listens and responds to commands on the console port | |
| − | + | ** Command list: status [(running|paused|stopped), molecular system, x out of y steps completed, estimated time remaining, # nodes started, # of nodes current], checkpoint, pause, resume, stop. | |
| − | + | ** Command line option -nn interval for compact, refreshed display. | |
| − | + | ** First version of console has to be supplied with a hostname and port number. | |
| − | + | ** Future versions (possibly when we introduce the grandmother) can take a $FATCHOME environment variable that points to a mother.conf file (to get a port number) as a discovery mechanism. | |
| − | |||
| − | |||
* Develop test canon (Alex and Charlie) | * Develop test canon (Alex and Charlie) | ||
* Document pval_report.pl and compare_walltime.pl in Wiki (headings for each are already under HowTos) (Alex) | * Document pval_report.pl and compare_walltime.pl in Wiki (headings for each are already under HowTos) (Alex) | ||
* Supervise test runs, non-nfs, a2.7, all molecules, 1-4 nodes, bazaar and cairo, separate table (Alex) | * Supervise test runs, non-nfs, a2.7, all molecules, 1-4 nodes, bazaar and cairo, separate table (Alex) | ||
* rerun the following configurations and compare nfs/nonnfs (Alex) | * rerun the following configurations and compare nfs/nonnfs (Alex) | ||
| − | + | ** bazaar proteasome | |
| − | + | ** bazaar villin-urea | |
| − | + | ** cairo methanol 1-8 nodes | |
| − | + | ** cairo mixed | |
| − | + | ** cairo proteasome | |
| − | + | ** cairo water 1-8 nodes | |
| − | + | ** bazaar water | |
| − | |||
| − | |||
== Curriculum Modules == | == Curriculum Modules == | ||
Revision as of 23:04, 14 June 2005
(Need a notation for relative priority. Please don't delete anything unless we're updating this during a meeting.)
Plumbing
- Get PBS working on bazaar, cairo, athena, and ACL (Skylar)
- Setup WeatherDuck on hopper (Skylar)
- Problem with some serial ports
- Setup Amanda (Skylar)
- Copy /cluster/old-hopper to tape, give it to charlie (Skylar)
- Fiber uplink for bazaar (Charlie)
- Network lag, monitoring?
- Put Athena in the display cabinet
- Setup Povray on Athena
- Protect F@C source and molecular systems, open http, ftp?, ssh? at cluster.earlham.edu
- Update speedup and speedup/efficiency within DVT for endnodes (Alex)
LittleFe
Folding@Clusters
- Work with Betsy Ward to get the plumbing for F@C setup on the D224 OSX machines. Local user, document the setup with a Wiki entry. (Alex)
- Console (JoshM)
- Environment variable called $FATCHOME
- Command line
- Sockets to communicate with mother
- Variable in mother.conf for console port
- Mother listens and responds to commands on the console port
- Command list: status [(running|paused|stopped), molecular system, x out of y steps completed, estimated time remaining, # nodes started, # of nodes current], checkpoint, pause, resume, stop.
- Command line option -nn interval for compact, refreshed display.
- First version of console has to be supplied with a hostname and port number.
- Future versions (possibly when we introduce the grandmother) can take a $FATCHOME environment variable that points to a mother.conf file (to get a port number) as a discovery mechanism.
- Develop test canon (Alex and Charlie)
- Document pval_report.pl and compare_walltime.pl in Wiki (headings for each are already under HowTos) (Alex)
- Supervise test runs, non-nfs, a2.7, all molecules, 1-4 nodes, bazaar and cairo, separate table (Alex)
- rerun the following configurations and compare nfs/nonnfs (Alex)
- bazaar proteasome
- bazaar villin-urea
- cairo methanol 1-8 nodes
- cairo mixed
- cairo proteasome
- cairo water 1-8 nodes
- bazaar water
Curriculum Modules
- Producing a cluster/distro specific set of modules out of one base unit
- Generating a wiki entry and repository entry from one base unit
